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Primary-literature peptidemedium evidence

PEPDIA-PLP-002970

mAc-AMP2

Aliases: mAc-AMP2

Normalized sequence

VGECVRGRCPSGACCSQWGYCGKGPKYCGR

30 amino acids

Release PepDiana-V1-20260620

53

Activity records

1

Source papers

46

Positive

7

Negative / threshold

Versioned scientific descriptors

Physicochemical properties and standard representations

calculated sequence and structure

Reported properties

No separate physicochemical property was reported in the primary-literature identity record. PepDiana release values are shown as computed properties.

Computed properties

physchem-20260620

Molecular weight

3168.6579 Da

Molecular formula

C130H203N43O38S6

Theoretical pI

8.9195

Net charge at pH 7

3.6734

GRAVY

-0.4733

Instability index

32.7567

Aromaticity

0.1

Topological polar surface area

1304.48 Ų

cLogP

-17.4163

Hydrogen-bond donors

53

Hydrogen-bond acceptors

48

Rotatable bonds

99

Method: PepDiana sequence/structure descriptor pipeline

Tool: Biopython+RDKit · Biopython 1.85; RDKit 2024.09.6

Calculated: 2026-06-20T11:01:38.358971+00:00

Assumptions: ph=7; termini=free N-terminus and free C-terminus for simple linear peptides; stereochemistry=standard L-amino acids; smiles_length_limit=200

Sequence representations

representations-20260620

ProForma 2.0

validated simple linear

VGECVRGRCPSGACCSQWGYCGKGPKYCGR

HELM 2.0

validated simple linear

PEPTIDE1{V.G.E.C.V.R.G.R.C.P.S.G.A.C.C.S.Q.W.G.Y.C.G.K.G.P.K.Y.C.G.R}$$$$V2.0

Canonical SMILES

validated

CC(NC(=O)CNC(=O)C(CO)NC(=O)C1CCCN1C(=O)C(CS)NC(=O)C(CCCNC(=N)N)NC(=O)CNC(=O)C(CCCNC(=N)N)NC(=O)C(NC(=O)C(CS)NC(=O)C(CCC(=O)O)NC(=O)CNC(=O)C(N)C(C)C)C(C)C)C(=O)NC(CS)C(=O)NC(CS)C(=O)NC(CO)C(=O)NC(CCC(N)=O)C(=O)NC(Cc1c[nH]c2ccccc12)C(=O)NCC(=O)NC(Cc1ccc(O)cc1)C(=O)NC(CS)C(=O)NCC(=O)NC(CCCCN)C(=O)NCC(=O)N1CCCC1C(=O)NC(CCCCN)C(=O)NC(Cc1ccc(O)cc1)C(=O)NC(CS)C(=O)NCC(=O)NC(CCCNC(=N)N)C(=O)O

Isomeric SMILES

validated

CC(C)[C@H](N)C(=O)NCC(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](CS)C(=O)N[C@H](C(=O)N[C@@H](CCCNC(=N)N)C(=O)NCC(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CS)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CO)C(=O)NCC(=O)N[C@@H](C)C(=O)N[C@@H](CS)C(=O)N[C@@H](CS)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)NCC(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@@H](CS)C(=O)NCC(=O)N[C@@H](CCCCN)C(=O)NCC(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@@H](CS)C(=O)NCC(=O)N[C@@H](CCCNC(=N)N)C(=O)O)C(C)C

Paper-level observations

Experimental evidence grouped by activity

Antimicrobial 50 records

PMC12655060

50 observations
Toxicity 3 records

PMC12655060

3 observations
ToxicityCytotoxicPositive observation
Record detail

Section 3.7: cell viability of approximately 100% was observed even at the peptide concentration of 100 µM in the case of the Caco-2 cell monolayer.

Measure
cell_viability
Value
~100%
Target
Caco-2
Assay
Not reported by source
Source publication

Citation and release provenance

Cite this identity as PepDiana record PEPDIA-PLP-002970, release PepDiana-V1-20260620. Experimental observations retain their paper, mention, and activity-record identifiers.

Record updated: 2026-06-22T07:14:26.229247+00:00