ProForma 2.0
validated simple linear
VTN
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PEPDIA-INT-068532
SilverPepDiana tier derived from the internal quality score plus activity and literature coverage; it is not an external database rating.Unnamed peptide
65
Quality PepDiana 0–100 composite of sequence, source, activity, literature, and cross-database evidence completeness.
4
Source DBs
6
Activities
4
Source refs
2
Literature
0
Patents
Integrated record
Sequence and molecular profile
VTN
Indexed sequence3 aa
1VTN
Length
3
Molecular weight
332.36 Da
Formula
C13H24N4O6
Structure type
Linear
Synthesis
Synthetic
Chirality
-
Family
-
Gene
-
Residue composition
V
1
T
1
N
1
Physicochemical profile
Hydrophobic1
Membrane affinity proxy
Polar2
Solubility proxy
Charged0
Net charge proxy +0
Aromatic0
Binding interaction proxy
Versioned scientific descriptors
Physicochemical properties and standard representations
Reported properties
Legacy compatibility fields are materialized from the versioned PepDiana computed release; no separate source-reported property is available.
Computed properties
physchem-20260620Molecular weight
332.3528 Da
Molecular formula
C13H24N4O6
Theoretical pI
5.495
Net charge at pH 7
-0.266
GRAVY
0
Instability index
-71.7333
Aromaticity
0
Topological polar surface area
184.84 Ų
cLogP
-2.7199
Hydrogen-bond donors
6
Hydrogen-bond acceptors
6
Rotatable bonds
9
Method: PepDiana sequence/structure descriptor pipeline
Tool: Biopython+RDKit · Biopython 1.85; RDKit 2024.09.6
Calculated: 2026-06-20T11:01:38.358971+00:00
Assumptions: ph=7; termini=free N-terminus and free C-terminus for simple linear peptides; stereochemistry=standard L-amino acids; smiles_length_limit=200
Sequence representations
HELM 2.0
validated simple linear
PEPTIDE1{V.T.N}$$$$V2.0
Canonical SMILES
validated
CC(C)C(N)C(=O)NC(C(=O)NC(CC(N)=O)C(=O)O)C(C)O
Isomeric SMILES
validated
CC(C)[C@H](N)C(=O)N[C@H](C(=O)N[C@@H](CC(N)=O)C(=O)O)[C@@H](C)O
Follow-up research
External analysis tools
Run BLASTPSearch similar protein or peptide sequences at NCBI.Search UniProtLook for related UniProtKB entries using the sequence.Search PubMedFind literature context for this peptide record.Search PubChemOpen chemistry search with the canonical SMILES string.
Links open third-party resources with the current PepDiana sequence, record name, or chemistry notation as the initial query.
Research workflow
Citation and local history
BibTeX
@misc{PEPDIA-INT-068532,
title = {Unnamed peptide},
author = {{PepDiana Consortium}},
year = {2026},
howpublished = {PepDiana Multifunctional Peptide Database},
url = {http://127.0.0.1:3004/peptides/PEPDIA-INT-068532},
note = {Accessed from local PepDiana development build}
}APA-style note
Unnamed peptide. (2026). PepDiana record PEPDIA-INT-068532. PepDiana Multifunctional Peptide Database. http://127.0.0.1:3004/peptides/PEPDIA-INT-068532
This record is saved to local recent-view history so it can reappear on the peptide browser page.
Integrated source-database annotations
Biological activity (6 records)
| Stable record | Activity | Subtype | Value | Target | Assay method | Source |
|---|---|---|---|---|---|---|
| CTPDB_P068532_ACT_camp_0001 | Antimicrobial | Anti-Gram+ | Not available in the current structured import | Unknown | Not reported by source | CAMPSQ21483camp / linked |
| CTPDB_P068532_ACT_camp_0002 | Antimicrobial | Anti-Gram- | Not available in the current structured import | Unknown | Not reported by source | CAMPSQ21483camp / linked |
| CTPDB_P068532_ACT_dbaasp_0003 | Antimicrobial | - | NA | HIV-1 | Not reported by source | DBAASPS_6019_chain0dbaasp / linked |
| CTPDB_P068532_ACT_hipdb_0000 | Antiviral | Anti-HIV | Low | HIV | Not reported by source | HIPdb_HIP1070hipdb / unavailable |
| CTPDB_P068532_ACT_satpdb_0004 | Antiviral | - | Not available in the current structured import | Unknown | Not reported by source | satpdb18873satpdb / linked |
| CTPDB_P068532_ACT_satpdb_0005 | Antimicrobial | - | Not available in the current structured import | Unknown | Not reported by source | satpdb18873satpdb / linked |
Provenance
Source database records (4)
Citation trail
Literature (2 records)
{"pubmed_id": "9425262.0", "paper": "The p2gag peptide, AEAMSQVTNTATIM, processed from HIV-1 Pr55gag was found to be a suicide inhibitor of HIV-1 protease.", "authors": "Misumi S, Kudo A, Azuma R, Tomonaga M, Furuishi K, Shoji S.", "reference": "Biochem Biophys Res Commun. 1997 Dec 18;241(2):275-80."}
{"pubmed_id": "9425262.0", "paper": "The p2gag peptide, AEAMSQVTNTATIM, processed from HIV-1 Pr55gag was found to be a suicide inhibitor of HIV-1 protease.", "authors": "Misumi S, Kudo A, Azuma R, Tomonaga M, Furuishi K, Shoji S.", "reference": "Biochem Biophys Res Commun. 1997 Dec 18;241(2):275-80."}
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Audit surface
Raw annotations and release metadata
Integrated record last updated: 2026-04-15T00:59:13.602083+00:00
Modification summary
No structured modification annotations are available for this record.
Source metadata
[
{
"source_db": "hipdb",
"organism_name": "Unknown"
},
{
"source_db": "camp",
"organism_name": "Unknown"
},
{
"source_db": "dbaasp",
"organism_name": "Unknown"
},
{
"source_db": "satpdb",
"organism_name": "Unknown"
}
]Structure metadata
{
"source_db": "satpdb",
"dssp_states": "CCC"
}