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PEPDIA-INT-062848

Gold

Sequence 20 from patent US 7001883

70

Quality

2

Source DBs

4

Activities

12

Source refs

8

Literature

0

Patents

Integrated record

Sequence and molecular profile

GCCSDPRCAWRC
Indexed sequence12 aa
1GCCSDPRCAWRC

Length

12

Molecular weight

1356.61 Da

Formula

C52H81N19O16S4

Structure type

Linear

Synthesis

-

Chirality

-

Family

-

Gene

-

Residue composition

C
4
R
2
G
1
S
1
D
1
P
1
A
1
W
1

Physicochemical profile

Hydrophobic2

Membrane affinity proxy

Polar5

Solubility proxy

Charged3

Net charge proxy +1

Aromatic1

Binding interaction proxy

Versioned scientific descriptors

Physicochemical properties and standard representations

calculated sequence and structure

Reported properties

Legacy compatibility fields are materialized from the versioned PepDiana computed release; no separate source-reported property is available.

Computed properties

physchem-20260620

Molecular weight

1356.5773 Da

Molecular formula

C52H81N19O16S4

Theoretical pI

7.8913

Net charge at pH 7

0.7216

GRAVY

-0.3667

Instability index

2.8833

Aromaticity

0.0833

Topological polar surface area

571.75 Ų

cLogP

-7.6747

Hydrogen-bond donors

25

Hydrogen-bond acceptors

21

Rotatable bonds

39

Method: PepDiana sequence/structure descriptor pipeline

Tool: Biopython+RDKit · Biopython 1.85; RDKit 2024.09.6

Calculated: 2026-06-20T11:01:38.358971+00:00

Assumptions: ph=7; termini=free N-terminus and free C-terminus for simple linear peptides; stereochemistry=standard L-amino acids; smiles_length_limit=200

Sequence representations

representations-20260620 · RDKit 2024.09.6

ProForma 2.0

validated simple linear

GCCSDPRCAWRC

HELM 2.0

validated simple linear

PEPTIDE1{G.C.C.S.D.P.R.C.A.W.R.C}$$$$V2.0

Canonical SMILES

validated

CC(NC(=O)C(CS)NC(=O)C(CCCNC(=N)N)NC(=O)C1CCCN1C(=O)C(CC(=O)O)NC(=O)C(CO)NC(=O)C(CS)NC(=O)C(CS)NC(=O)CN)C(=O)NC(Cc1c[nH]c2ccccc12)C(=O)NC(CCCNC(=N)N)C(=O)NC(CS)C(=O)O

Isomeric SMILES

validated

C[C@H](NC(=O)[C@H](CS)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H]1CCCN1C(=O)[C@H](CC(=O)O)NC(=O)[C@H](CO)NC(=O)[C@H](CS)NC(=O)[C@H](CS)NC(=O)CN)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CS)C(=O)O

Follow-up research

External analysis tools

Run BLASTPSearch similar protein or peptide sequences at NCBI.Search UniProtLook for related UniProtKB entries using the sequence.Search PubMedFind literature context for this peptide record.Search PubChemOpen chemistry search with the canonical SMILES string.

Links open third-party resources with the current PepDiana sequence, record name, or chemistry notation as the initial query.

Research workflow

Citation and local history

BibTeX

@misc{PEPDIA-INT-062848,
  title = {Sequence 20 from patent US 7001883},
  author = {{PepDiana Consortium}},
  year = {2026},
  howpublished = {PepDiana Multifunctional Peptide Database},
  url = {http://127.0.0.1:3004/peptides/PEPDIA-INT-062848},
  note = {Accessed from local PepDiana development build}
}

APA-style note

Sequence 20 from patent US 7001883. (2026). PepDiana record PEPDIA-INT-062848. PepDiana Multifunctional Peptide Database. http://127.0.0.1:3004/peptides/PEPDIA-INT-062848

This record is saved to local recent-view history so it can reappear on the peptide browser page.

Integrated source-database annotations

Biological activity (4 records)

Stable recordActivitySubtypeValueTargetAssay methodSource
CTPDB_P062848_ACT_conoserver_0000Neuroactive/Ion ChannelToxinNot available in the current structured importNicotinic acetylcholine receptorsNot reported by sourceP04412conoserver / linked
CTPDB_P062848_ACT_satpdb_0001UnknownmiscellaneousNot available in the current structured importUnknownNot reported by sourcesatpdb14025satpdb / linked
CTPDB_P062848_ACT_satpdb_0002UnknownmiscellaneousNot available in the current structured importUnknownNot reported by sourcesatpdb25559satpdb / linked
CTPDB_P062848_ACT_satpdb_0003ToxicityGeneral ToxicNot available in the current structured importUnknownNot reported by sourcesatpdb29133satpdb / linked

Provenance

Source database records (12)

Source-specific sequence or modification context. One or more source records use a sequence notation that differs from the canonical backbone. Open each raw sequence before interpreting stereochemistry, terminal groups, or non-standard residues.

conoserver

P01858

Raw sequence

GCCSDPRCAWRC

conoserver

P00540

Raw sequence

GCCSDPRCAWRC

conoserver

P02322

Raw sequence

GCCSDPRCAWRC

conoserver

P02369

Raw sequence

GCCSDPRCAWRC

conoserver

P02424

Raw sequence

GCCSDPRCAWRC

conoserver

P02465

Raw sequence

GCCSDPRCAWRC

conoserver

P02850

Raw sequence

GCCSDPRCAWRC

conoserver

P04412

Raw sequence

GCCSDPRCAWRC(nh2)

conoserver

P09071

Raw sequence

GCCSDPRCAWRC(nh2)

satpdb

satpdb14025

Raw sequence

GCCSDPRCAWRC

satpdb

satpdb25559

Raw sequence

GCCSDPRCAWRC

satpdb

satpdb29133

Raw sequence

GCCSDPRCAWRC

Citation trail

Literature (8 records)

[{"full_text": "Craik,D.J., Daly,N.L. and Nielsen,K.J. (2006) Cyclized conotoxin peptidesPatent: US 7001883-A 29 21-FEB-2006; The University of Queensland; Queensland; AU;", "authors": "Craik,D.J., Daly,N.L. and Nielsen,K.J.", "year": "2006", "title": "Cyclized conotoxin peptidesPatent: US 7001883-A 29 21-FEB-2006; The University of Queensland; Queensland; AU;", "journal": "", "url": null, "pmid": null}]

[{"full_text": "Craik,D.J., Daly,N.L. and Nielsen,K.J. (2006) Cyclized conotoxin peptidesPatent: US 7001883-A 29 21-FEB-2006; The University of Queensland; Queensland; AU;", "authors": "Craik,D.J., Daly,N.L. and Nielsen,K.J.", "year": "2006", "title": "Cyclized conotoxin peptidesPatent: US 7001883-A 29 21-FEB-2006; The University of Queensland; Queensland; AU;", "journal": "", "url": null, "pmid": null}]

--

[{"full_text": "Olivera,B.M., McIntosh,J.M., Yoshikami,D., Cartier,G.E. and Luo,S. (2005) Uses of .alpha.-conotoxin peptidesPatent: US 6958323 25-OCT-2005", "authors": "Olivera,B.M., McIntosh,J.M., Yoshikami,D., Cartier,G.E. and Luo,S.", "year": "2005", "title": "Uses of .alpha.-conotoxin peptidesPatent: US 6958323 25-OCT-2005", "journal": "", "url": null, "pmid": null}]

[{"full_text": "Olivera,B.M., McIntosh,J.M., Yoshikami,D., Cartier,G.E. and Luo,S. (2005) Uses of .alpha.-conotoxin peptidesPatent: US 6958323 25-OCT-2005", "authors": "Olivera,B.M., McIntosh,J.M., Yoshikami,D., Cartier,G.E. and Luo,S.", "year": "2005", "title": "Uses of .alpha.-conotoxin peptidesPatent: US 6958323 25-OCT-2005", "journal": "", "url": null, "pmid": null}]

--

[{"full_text": "Olivera,B.M., Cruz,L.J., Hillyard,D.R., McIntosh,J.Michael. and Santos,A.O. (1997) Conotoxin peptidesPatent: US 5633347 27-MAY-1997", "authors": "Olivera,B.M., Cruz,L.J., Hillyard,D.R., McIntosh,J.Michael. and Santos,A.O.", "year": "1997", "title": "Conotoxin peptidesPatent: US 5633347 27-MAY-1997", "journal": "", "url": null, "pmid": null}]

[{"full_text": "Olivera,B.M., Cruz,L.J., Hillyard,D.R., McIntosh,J.Michael. and Santos,A.O. (1997) Conotoxin peptidesPatent: US 5633347 27-MAY-1997", "authors": "Olivera,B.M., Cruz,L.J., Hillyard,D.R., McIntosh,J.Michael. and Santos,A.O.", "year": "1997", "title": "Conotoxin peptidesPatent: US 5633347 27-MAY-1997", "journal": "", "url": null, "pmid": null}]

--

[{"full_text": "Olivera,B.M., Cruz,L.J., Hillyard,D.R., McIntosh,J.Michael. and Santos,A.D. (1996) Conotoxin peptidesPatent: US 5514774 07-MAY-1996", "authors": "Olivera,B.M., Cruz,L.J., Hillyard,D.R., McIntosh,J.Michael. and Santos,A.D.", "year": "1996", "title": "Conotoxin peptidesPatent: US 5514774 07-MAY-1996", "journal": "", "url": null, "pmid": null}]

[{"full_text": "Olivera,B.M., Cruz,L.J., Hillyard,D.R., McIntosh,J.Michael. and Santos,A.D. (1996) Conotoxin peptidesPatent: US 5514774 07-MAY-1996", "authors": "Olivera,B.M., Cruz,L.J., Hillyard,D.R., McIntosh,J.Michael. and Santos,A.D.", "year": "1996", "title": "Conotoxin peptidesPatent: US 5514774 07-MAY-1996", "journal": "", "url": null, "pmid": null}]

--

[{"full_text": "Olivera,B.M., Cruz,L.J., Hillyard,D.R., McIntosh,J.Michael. and Santos,A.D. (1996) Process and primers for identifying nucleic acids encoding A-lineage conotoxin peptidesPatent: US 5589340 31-DEC-1996", "authors": "Olivera,B.M., Cruz,L.J., Hillyard,D.R., McIntosh,J.Michael. and Santos,A.D.", "year": "1996", "title": "Process and primers for identifying nucleic acids encoding A-lineage conotoxin peptidesPatent: US 5589340 31-DEC-1996", "journal": "", "url": null, "pmid": null}]

[{"full_text": "Olivera,B.M., Cruz,L.J., Hillyard,D.R., McIntosh,J.Michael. and Santos,A.D. (1996) Process and primers for identifying nucleic acids encoding A-lineage conotoxin peptidesPatent: US 5589340 31-DEC-1996", "authors": "Olivera,B.M., Cruz,L.J., Hillyard,D.R., McIntosh,J.Michael. and Santos,A.D.", "year": "1996", "title": "Process and primers for identifying nucleic acids encoding A-lineage conotoxin peptidesPatent: US 5589340 31-DEC-1996", "journal": "", "url": null, "pmid": null}]

--

Audit surface

Raw annotations and release metadata

Integrated record last updated: 2026-04-15T00:59:16.964448+00:00

Modification summary

No structured modification annotations are available for this record.

Source metadata
[
  {
    "source_db": "conoserver",
    "organism_name": "Unknown"
  },
  {
    "source_db": "satpdb",
    "organism_name": "Unknown"
  }
]
Structure metadata
{
  "source_db": "satpdb",
  "dssp_states": "CCTTSTTTCSCC"
}