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PEPDIA-INT-028076

Bronze

Sequence 17 from patent US 7001883

50

Quality

2

Source DBs

0

Activities

4

Source refs

4

Literature

0

Patents

Integrated record

Sequence and molecular profile

CLSXGSSCSXTSYNCCRSCNXYSRKCR
Indexed sequence27 aa
1CLSXGSSCSXTSYNCCRSCNXYSRKCR

Length

27

Molecular weight

-

Formula

-

Structure type

-

Synthesis

-

Chirality

-

Family

-

Gene

-

Residue composition

S
7
C
6
X
3
R
3
Y
2
N
2
L
1
G
1
T
1
K
1

Physicochemical profile

Hydrophobic3

Membrane affinity proxy

Polar16

Solubility proxy

Charged4

Net charge proxy +4

Aromatic2

Binding interaction proxy

Versioned scientific descriptors

Physicochemical properties and standard representations

not calculated nonstandard sequence

Reported properties

Legacy compatibility fields are materialized from the versioned PepDiana computed release; no separate source-reported property is available.

Computed properties

physchem-20260620

Molecular weight

Not calculated

Molecular formula

Not calculated

Theoretical pI

Not calculated

Net charge at pH 7

Not calculated

GRAVY

Not calculated

Instability index

Not calculated

Aromaticity

Not calculated

Topological polar surface area

Not calculated

cLogP

Not calculated

Hydrogen-bond donors

Not calculated

Hydrogen-bond acceptors

Not calculated

Rotatable bonds

Not calculated

Method: PepDiana sequence/structure descriptor pipeline

Tool: Biopython+RDKit · Biopython 1.85; RDKit 2024.09.6

Calculated: 2026-06-20T11:01:38.358971+00:00

Assumptions: ph=7; termini=free N-terminus and free C-terminus for simple linear peptides; stereochemistry=standard L-amino acids; smiles_length_limit=200

Sequence representations

representations-20260620 · RDKit 2024.09.6

ProForma 2.0

not available nonstandard sequence

Not calculated for this record

HELM 2.0

not available nonstandard sequence

Not calculated for this record

Canonical SMILES

not available nonstandard sequence

Not calculated for this record

Isomeric SMILES

not available nonstandard sequence

Not calculated for this record

Follow-up research

External analysis tools

Run BLASTPSearch similar protein or peptide sequences at NCBI.Search UniProtLook for related UniProtKB entries using the sequence.Search PubMedFind literature context for this peptide record.

Links open third-party resources with the current PepDiana sequence, record name, or chemistry notation as the initial query.

Research workflow

Citation and local history

BibTeX

@misc{PEPDIA-INT-028076,
  title = {Sequence 17 from patent US 7001883},
  author = {{PepDiana Consortium}},
  year = {2026},
  howpublished = {PepDiana Multifunctional Peptide Database},
  url = {http://127.0.0.1:3004/peptides/PEPDIA-INT-028076},
  note = {Accessed from local PepDiana development build}
}

APA-style note

Sequence 17 from patent US 7001883. (2026). PepDiana record PEPDIA-INT-028076. PepDiana Multifunctional Peptide Database. http://127.0.0.1:3004/peptides/PEPDIA-INT-028076

This record is saved to local recent-view history so it can reappear on the peptide browser page.

Provenance

Source database records (4)

Source-specific sequence or modification context. One or more source records use a sequence notation that differs from the canonical backbone. Open each raw sequence before interpreting stereochemistry, terminal groups, or non-standard residues.

b3pdb

b3pdb_1094

Raw sequence

CLS-Hyp-GSSCS-Hyp-TSYNCCRSCN-Hyp-YSRKCR

conoserver

P01861

Raw sequence

CLSXGSSCSXTSYNCCRSCNXYSRKCR

conoserver

P02251

Raw sequence

CLSXGSSCSXTSYNCCRSCNXYSRKCR

conoserver

P02263

Raw sequence

CLSXGSSCSXTSYNCCRSCNXYSRKCR

Citation trail

Literature (4 records)

[{"full_text": "Craik,D.J., Daly,N.L. and Nielsen,K.J. (2006) Cyclized conotoxin peptidesPatent: US 7001883-A 29 21-FEB-2006; The University of Queensland; Queensland; AU;", "authors": "Craik,D.J., Daly,N.L. and Nielsen,K.J.", "year": "2006", "title": "Cyclized conotoxin peptidesPatent: US 7001883-A 29 21-FEB-2006; The University of Queensland; Queensland; AU;", "journal": "", "url": null, "pmid": null}]

[{"full_text": "Craik,D.J., Daly,N.L. and Nielsen,K.J. (2006) Cyclized conotoxin peptidesPatent: US 7001883-A 29 21-FEB-2006; The University of Queensland; Queensland; AU;", "authors": "Craik,D.J., Daly,N.L. and Nielsen,K.J.", "year": "2006", "title": "Cyclized conotoxin peptidesPatent: US 7001883-A 29 21-FEB-2006; The University of Queensland; Queensland; AU;", "journal": "", "url": null, "pmid": null}]

--

[{"full_text": "Miljanich,G.P., Bitner,R.S., Bowersox,S.S., Fox,J.A., Valentino,K.L., Yamashiro,D.H. and Tsubokawa,M. (1993) Method of reducing neuronal damage using omega conotoxin peptidesPatent: US 5189020-A 29 23-FEB-1993; Neurex Corporation; Menlo Park, CA", "authors": "Miljanich,G.P., Bitner,R.S., Bowersox,S.S., Fox,J.A., Valentino,K.L., Yamashiro,D.H. and Tsubokawa,M.", "year": "1993", "title": "Method of reducing neuronal damage using omega conotoxin peptidesPatent: US 5189020-A 29 23-FE

[{"full_text": "Miljanich,G.P., Bitner,R.S., Bowersox,S.S., Fox,J.A., Valentino,K.L., Yamashiro,D.H. and Tsubokawa,M. (1993) Method of reducing neuronal damage using omega conotoxin peptidesPatent: US 5189020-A 29 23-FEB-1993; Neurex Corporation; Menlo Park, CA", "authors": "Miljanich,G.P., Bitner,R.S., Bowersox,S.S., Fox,J.A., Valentino,K.L., Yamashiro,D.H. and Tsubokawa,M.", "year": "1993", "title": "Method of reducing neuronal damage using omega conotoxin peptidesPatent: US 5189020-A 29 23-FE

--

[{"full_text": "Pang,I.-H., Kapin,M. and Hellberg,M. (1999) Use of .omega.-conotoxin analogs for treating retinal and optic nerve head damagePatent: US 5965534-A 7 12-OCT-1999;", "authors": "Pang,I.-H., Kapin,M. and Hellberg,M.", "year": "1999", "title": "Use of .omega.-conotoxin analogs for treating retinal and optic nerve head damagePatent: US 5965534-A 7 12-OCT-1999;", "journal": "", "url": null, "pmid": null}]

[{"full_text": "Pang,I.-H., Kapin,M. and Hellberg,M. (1999) Use of .omega.-conotoxin analogs for treating retinal and optic nerve head damagePatent: US 5965534-A 7 12-OCT-1999;", "authors": "Pang,I.-H., Kapin,M. and Hellberg,M.", "year": "1999", "title": "Use of .omega.-conotoxin analogs for treating retinal and optic nerve head damagePatent: US 5965534-A 7 12-OCT-1999;", "journal": "", "url": null, "pmid": null}]

--

Audit surface

Raw annotations and release metadata

Integrated record last updated: 2026-04-15T00:59:13.602083+00:00

Modification summary

No structured modification annotations are available for this record.

Source metadata
[
  {
    "source_db": "b3pdb",
    "organism_name": "Unknown"
  },
  {
    "source_db": "conoserver",
    "organism_name": "Unknown"
  }
]