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PEPDIA-INT-005373

Gold

Caseicin B

85

Quality

4

Source DBs

35

Activities

13

Source refs

9

Literature

1

Patents

Integrated record

Sequence and molecular profile

VLNENLLR
Indexed sequence8 aa
1VLNENLLR

Length

8

Molecular weight

970.14 Da

Formula

C42H75N13O13

Structure type

-

Synthesis

Synthetic

Chirality

-

Family

-

Gene

-

Residue composition

L
3
N
2
V
1
E
1
R
1

Physicochemical profile

Hydrophobic4

Membrane affinity proxy

Polar2

Solubility proxy

Charged2

Net charge proxy +0

Aromatic0

Binding interaction proxy

Versioned scientific descriptors

Physicochemical properties and standard representations

calculated sequence and structure

Reported properties

Legacy compatibility fields are materialized from the versioned PepDiana computed release; no separate source-reported property is available.

Computed properties

physchem-20260620

Molecular weight

970.124 Da

Molecular formula

C42H75N13O13

Theoretical pI

5.9722

Net charge at pH 7

-0.2632

GRAVY

0.075

Instability index

32.825

Aromaticity

0

Topological polar surface area

452.4 Ų

cLogP

-3.5349

Hydrogen-bond donors

15

Hydrogen-bond acceptors

13

Rotatable bonds

33

Method: PepDiana sequence/structure descriptor pipeline

Tool: Biopython+RDKit · Biopython 1.85; RDKit 2024.09.6

Calculated: 2026-06-20T11:01:38.358971+00:00

Assumptions: ph=7; termini=free N-terminus and free C-terminus for simple linear peptides; stereochemistry=standard L-amino acids; smiles_length_limit=200

Sequence representations

representations-20260620 · RDKit 2024.09.6

ProForma 2.0

validated simple linear

VLNENLLR

HELM 2.0

validated simple linear

PEPTIDE1{V.L.N.E.N.L.L.R}$$$$V2.0

Canonical SMILES

validated

CC(C)CC(NC(=O)C(CC(C)C)NC(=O)C(CC(N)=O)NC(=O)C(CCC(=O)O)NC(=O)C(CC(N)=O)NC(=O)C(CC(C)C)NC(=O)C(N)C(C)C)C(=O)NC(CCCNC(=N)N)C(=O)O

Isomeric SMILES

validated

CC(C)C[C@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](N)C(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)O

Follow-up research

External analysis tools

Run BLASTPSearch similar protein or peptide sequences at NCBI.Search UniProtLook for related UniProtKB entries using the sequence.Search PubMedFind literature context for this peptide record.Search PubChemOpen chemistry search with the canonical SMILES string.

Links open third-party resources with the current PepDiana sequence, record name, or chemistry notation as the initial query.

Research workflow

Citation and local history

BibTeX

@misc{PEPDIA-INT-005373,
  title = {Caseicin B},
  author = {{PepDiana Consortium}},
  year = {2026},
  howpublished = {PepDiana Multifunctional Peptide Database},
  url = {http://127.0.0.1:3004/peptides/PEPDIA-INT-005373},
  note = {Accessed from local PepDiana development build}
}

APA-style note

Caseicin B. (2026). PepDiana record PEPDIA-INT-005373. PepDiana Multifunctional Peptide Database. http://127.0.0.1:3004/peptides/PEPDIA-INT-005373

This record is saved to local recent-view history so it can reappear on the peptide browser page.

Integrated source-database annotations

Biological activity (35 records)

Stable recordActivitySubtypeValueTargetAssay methodSource
CTPDB_P005373_ACT_camp_0000AntimicrobialAntibacterialNot available for this observationUnknownNot reported by sourceCAMPSQ19445camp / linked
CTPDB_P005373_ACT_camp_0001AntimicrobialAnti-Gram-Not available for this observationUnknownNot reported by sourceCAMPSQ19445camp / linked
CTPDB_P005373_ACT_dbaasp_0002Antimicrobial-1250 µMCronobacter sakazakii DPC 6440Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0003Antimicrobial-625 µMCronobacter sakazakii DSM 4485Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0004Antimicrobial-625 µMCronobacter sakazakii ATCC BAA-894Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0005Antimicrobial-625 µMCronobacter muytjensii ATCC 51329Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0006Antimicrobial-1250 µMSalmonella enterica subsp. enterica serovar Typhimurium LT2Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0007Antimicrobial-1250 µMEscherichia coli NCIMB 11843Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0008Antimicrobial-1250 µMKlebsiella pneumoniae NCIMB 13218Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0009Antimicrobial-1250 µMPseudomonas fluorescens NCIMB 9046Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0010Antimicrobial-1250 µMStaphylococcus aureus NCTC 8325-4Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0011Antimicrobial-1250 µMStaphylococcus aureus SA113Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0012Antimicrobial-1250 µMStaphylococcus aureus RF122Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0013Antimicrobial-1250 µMStaphylococcus aureus NewmanNot reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0014Antimicrobial-1250 µMStaphylococcus aureus RN4220Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0015Antimicrobial-2000 µg/mlEscherichia coli O157:H7Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0016Antimicrobial-1000 µg/mlListeria monocytogenes NCTC 11994Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0017Antimicrobial->2000 µg/mlSalmonella enterica subsp. enterica serovar Typhimurium DT104Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0018Antimicrobial-1000 µg/mlPseudomonas putida ATCC 49128Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0019Antimicrobial-2000 µg/mlStaphylococcus aureus NCTC 7428Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0020Antimicrobial-2000 µg/mlEscherichia coli O111Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0021Antimicrobial->128 µMEscherichia coli K-12Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0022Antimicrobial->128 µMStaphylococcus aureus ATCC 12600Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dbaasp_0023Antimicrobial-64 µMPseudomonas aeruginosa ATCC 27853Not reported by sourceDBAASPS_1111_chain0dbaasp / linked
CTPDB_P005373_ACT_dramp_0024Antimicrobial-Not available for this observationUnknownNot reported by sourceDRAMP09161dramp / linked
CTPDB_P005373_ACT_fermfoodb_0025Metabolic/CardiovascularAntihypertensiveNot available in the current structured importUnknownLC-MS with Q Exactive Plus hybridquadrupole-Orbitrap mass spectrometerFermFooDB_Casein_FMDB1784fermfoodb / linked
CTPDB_P005373_ACT_fermfoodb_0026Metabolic/CardiovascularAntihypertensiveNot available in the current structured importUnknownLC-MS with Q Exactive Plus hybridquadrupole-Orbitrap mass spectrometerFermFooDB_Casein_FMDB1785fermfoodb / linked
CTPDB_P005373_ACT_fermfoodb_0027Metabolic/CardiovascularAntihypertensiveNot available in the current structured importUnknownLC-MS with Q Exactive Plus hybridquadrupole-Orbitrap mass spectrometerFermFooDB_Casein_FMDB1786fermfoodb / linked
CTPDB_P005373_ACT_fermfoodb_0028Metabolic/CardiovascularAntihypertensiveNot available in the current structured importUnknownLC-MS with Q Exactive Plus hybridquadrupole-Orbitrap mass spectrometerFermFooDB_Casein_FMDB1787fermfoodb / linked
CTPDB_P005373_ACT_fermfoodb_0029Antimicrobial-0.22 mMUnknownMALDI-TOF-MSFermFooDB_Casein_FMDB884fermfoodb / linked
CTPDB_P005373_ACT_fermfoodb_0030Antimicrobial-Not available for this observationUnknownMALDI-TOF-MSFermFooDB_Casein_FMDB887fermfoodb / linked
CTPDB_P005373_ACT_fermfoodb_0031Antimicrobial-Not available for this observationUnknownMALDI-TOF-MSFermFooDB_Casein_FMDB889fermfoodb / linked
CTPDB_P005373_ACT_fermfoodb_0034Metabolic/CardiovascularAntihypertensiveNot available in the current structured importUnknownLC-MS with Q Exactive Plus hybridquadrupole-Orbitrap mass spectrometerFermFooDB_milk_FMDB1784fermfoodb / linked
CTPDB_P005373_ACT_fermfoodb_0033Metabolic/CardiovascularAntihypertensiveNot available in the current structured importUnknownLC-MS with Q Exactive Plus hybridquadrupole-Orbitrap mass spectrometerFermFooDB_milk_FMDB1785fermfoodb / linked
CTPDB_P005373_ACT_fermfoodb_0032Metabolic/CardiovascularAntihypertensiveNot available in the current structured importUnknownLC-MS with Q Exactive Plus hybridquadrupole-Orbitrap mass spectrometerFermFooDB_milk_FMDB1786fermfoodb / linked

Provenance

Source database records (13)

camp

CAMPSQ19445

Raw sequence

VLNENLLR

dbaasp

DBAASPS_1111_chain0

Raw sequence

VLNENLLR

dramp

DRAMP09161

Raw sequence

VLNENLLR

fermfoodb

FermFooDB_Casein_FMDB1784

Raw sequence

VLNENLLR

fermfoodb

FermFooDB_Casein_FMDB1785

Raw sequence

VLNENLLR

fermfoodb

FermFooDB_Casein_FMDB1786

Raw sequence

VLNENLLR

fermfoodb

FermFooDB_Casein_FMDB1787

Raw sequence

VLNENLLR

fermfoodb

FermFooDB_Casein_FMDB884

Raw sequence

VLNENLLR

fermfoodb

FermFooDB_Casein_FMDB887

Raw sequence

VLNENLLR

fermfoodb

FermFooDB_Casein_FMDB889

Raw sequence

VLNENLLR

fermfoodb

FermFooDB_milk_FMDB1786

Raw sequence

VLNENLLR

fermfoodb

FermFooDB_milk_FMDB1785

Raw sequence

VLNENLLR

fermfoodb

FermFooDB_milk_FMDB1784

Raw sequence

VLNENLLR

Citation trail

Literature (9 records)

{"pubmed_id": "PMD16517684"}

-

--

IP evidence

Patents (1)

US 20090214498

dramp

Audit surface

Raw annotations and release metadata

Integrated record last updated: 2026-04-15T00:59:15.996896+00:00

Modification summary

No structured modification annotations are available for this record.

Source metadata
[
  {
    "source_db": "camp",
    "organism_name": "Unknown"
  },
  {
    "source_db": "dbaasp",
    "organism_name": "Unknown"
  },
  {
    "source_db": "dramp",
    "organism_name": "Unknown"
  },
  {
    "source_db": "fermfoodb",
    "organism_name": "Unknown"
  }
]